IL_8VFT_241

3D structure

PDB id

8VFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 80S rabbit ribosome stalled by emetine with eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

8VFT|1|9|A|1580, 8VFT|1|9|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VFT|1|9|G|1550
8VFT|1|9|U|1551
8VFT|1|9|G|1552
8VFT|1|9|C|1553
8VFT|1|9|C|1554
8VFT|1|9|U|1555
8VFT|1|9|A|1556
8VFT|1|9|C|1557
8VFT|1|9|C|1558
*
8VFT|1|9|G|1577
8VFT|1|9|U|1578
8VFT|1|9|A|1579
8VFT|1|9|A|1580
8VFT|1|9|C|1581
8VFT|1|9|C|1582

Current chains

Chain 9

18S rRNA

Nearby chains

Chain DD

uS3

Chain KK

eS10

Chain UU

uS10

Chain dd

uS14