IL_8VK7_034

3D structure

PDB id

8VK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

CCGAUGGG*UUACUGACG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VK7|1|A|C|991
8VK7|1|A|C|992
8VK7|1|A|G|993
8VK7|1|A|A|994
8VK7|1|A|U|995
8VK7|1|A|G|996
8VK7|1|A|G|997
8VK7|1|A|G|998
*
8VK7|1|A|U|1009
8VK7|1|A|U|1010
8VK7|1|A|A|1011
8VK7|1|A|C|1012
8VK7|1|A|U|1013
8VK7|1|A|G|1014
8VK7|1|A|A|1015
8VK7|1|A|C|1016
8VK7|1|A|G|1017

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

GTPase HflX