IL_8VK7_056

3D structure

PDB id

8VK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

GAUGAAUC*GGUAGUAGUC

Length

18 nucleotides

Bulged bases

8VK7|1|A|A|1628

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VK7|1|A|G|1538
8VK7|1|A|A|1539
8VK7|1|A|U|1540
8VK7|1|A|G|1541
8VK7|1|A|A|1542
8VK7|1|A|A|1543
8VK7|1|A|U|1544
8VK7|1|A|C|1545
*
8VK7|1|A|G|1625
8VK7|1|A|G|1626
8VK7|1|A|U|1627
8VK7|1|A|A|1628
8VK7|1|A|G|1629
8VK7|1|A|U|1630
8VK7|1|A|A|1631
8VK7|1|A|G|1632
8VK7|1|A|U|1633
8VK7|1|A|C|1634

Current chains

Chain A

23S ribosomal RNA

Nearby chains