IL_8VM8_002
3D structure
- PDB id
- 8VM8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of coxsackievirus B3 RNA replication element sD-loop mutant in complex with Fab BL3-6
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.54 Å
Loop
- Sequence
- CUAG*CG
- Length
- 6 nucleotides
- Bulged bases
- 8VM8|1|R|U|49
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VM8_002 not in the Motif Atlas
- Geometric match to IL_8S95_001
- Geometric discrepancy: 0.1588
- The information below is about IL_8S95_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73452.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8VM8|1|R|C|48
8VM8|1|R|U|49
8VM8|1|R|A|50
8VM8|1|R|G|51
*
8VM8|1|R|C|81
8VM8|1|R|G|82
Current chains
- Chain R
- RNA (93-MER)
Nearby chains
No other chains within 10ÅColoring options: