IL_8VOP_091

3D structure

PDB id

8VOP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation coupled complex (TTC-B) containing mRNA with a 36 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

GGGG*CUUAC

Length

9 nucleotides

Bulged bases

8VOP|1|a|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOP|1|a|G|880
8VOP|1|a|G|881
8VOP|1|a|G|882
8VOP|1|a|G|883
*
8VOP|1|a|C|893
8VOP|1|a|U|894
8VOP|1|a|U|895
8VOP|1|a|A|896
8VOP|1|a|C|897

Current chains

Chain a

23S rRNA

Nearby chains

Chain v

50S ribosomal protein L16