IL_8VOR_011

3D structure

PDB id

8VOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 51 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGGGAUAAC*GCUAAUACCGC

Length

21 nucleotides

Bulged bases

8VOR|1|D|U|173

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOR|1|D|G|144
8VOR|1|D|G|145
8VOR|1|D|G|146
8VOR|1|D|G|147
8VOR|1|D|G|148
8VOR|1|D|A|149
8VOR|1|D|U|150
8VOR|1|D|A|151
8VOR|1|D|A|152
8VOR|1|D|C|153
*
8VOR|1|D|G|168
8VOR|1|D|C|169
8VOR|1|D|U|170
8VOR|1|D|A|171
8VOR|1|D|A|172
8VOR|1|D|U|173
8VOR|1|D|A|174
8VOR|1|D|C|175
8VOR|1|D|C|176
8VOR|1|D|G|177
8VOR|1|D|C|178

Current chains

Chain D

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S20