IL_8VOR_067
3D structure
- PDB id
- 8VOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 51 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCUGAAUC*GUGAG
- Length
- 13 nucleotides
- Bulged bases
- 8VOR|1|a|G|277
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VOR_067 not in the Motif Atlas
- Geometric match to IL_5J7L_253
- Geometric discrepancy: 0.1673
- The information below is about IL_5J7L_253
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77870.1
- Basepair signature
- cWW-L-R-L-tHS-L-cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8VOR|1|a|C|274
8VOR|1|a|C|275
8VOR|1|a|U|276
8VOR|1|a|G|277
8VOR|1|a|A|278
8VOR|1|a|A|279
8VOR|1|a|U|280
8VOR|1|a|C|281
*
8VOR|1|a|G|359
8VOR|1|a|U|360
8VOR|1|a|G|361
8VOR|1|a|A|362
8VOR|1|a|G|363
Current chains
- Chain a
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: