IL_8VOS_050
3D structure
- PDB id
- 8VOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 60 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- UACAAAG*CAUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 8VOS|1|D|U|1286
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VOS_050 not in the Motif Atlas
- Geometric match to IL_5J7L_054
- Geometric discrepancy: 0.0972
- The information below is about IL_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8VOS|1|D|U|1247
8VOS|1|D|A|1248
8VOS|1|D|C|1249
8VOS|1|D|A|1250
8VOS|1|D|A|1251
8VOS|1|D|A|1252
8VOS|1|D|G|1253
*
8VOS|1|D|C|1284
8VOS|1|D|A|1285
8VOS|1|D|U|1286
8VOS|1|D|A|1287
8VOS|1|D|A|1288
8VOS|1|D|A|1289
8VOS|1|D|G|1290
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain M
- Small ribosomal subunit protein uS7
- Chain O
- Small ribosomal subunit protein uS9
- Chain P
- Small ribosomal subunit protein uS10
- Chain S
- Small ribosomal subunit protein uS14
Coloring options: