IL_8VTW_226
3D structure
- PDB id
- 8VTW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.35 Å
Loop
- Sequence
- CGAUG*CUAAG
- Length
- 10 nucleotides
- Bulged bases
- 8VTW|1|2A|U|1420
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VTW_226 not in the Motif Atlas
- Homologous match to IL_8VTW_054
- Geometric discrepancy: 0.0681
- The information below is about IL_8VTW_054
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
8VTW|1|2A|C|1417
8VTW|1|2A|G|1418
8VTW|1|2A|A|1419
8VTW|1|2A|U|1420
8VTW|1|2A|G|1421
*
8VTW|1|2A|C|1577
8VTW|1|2A|U|1578
8VTW|1|2A|A|1579
8VTW|1|2A|A|1580
8VTW|1|2A|G|1581
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: