IL_8VTY_352
3D structure
- PDB id
- 8VTY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ciprofloxacin and protein Y at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GUUGG*CCAUC
- Length
- 10 nucleotides
- Bulged bases
- 8VTY|1|1A|U|1061, 8VTY|1|1A|C|1076
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VTY_352 not in the Motif Atlas
- Homologous match to IL_9DFE_042
- Geometric discrepancy: 0.2441
- The information below is about IL_9DFE_042
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VTY|1|1A|G|1059
8VTY|1|1A|U|1060
8VTY|1|1A|U|1061
8VTY|1|1A|G|1062
8VTY|1|1A|G|1063
*
8VTY|1|1A|C|1075
8VTY|1|1A|C|1076
8VTY|1|1A|A|1077
8VTY|1|1A|U|1078
8VTY|1|1A|C|1079
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1Q
- 50S ribosomal protein L16
- Chain 1Z
- 50S ribosomal protein L25
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