IL_8VVP_191
3D structure
- PDB id
- 8VVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Codon sampling state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 8VVP|1|ZA|U|172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVP_191 not in the Motif Atlas
- Geometric match to IL_8CRE_400
- Geometric discrepancy: 0.1544
- The information below is about IL_8CRE_400
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24485.1
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 4
Unit IDs
8VVP|1|ZA|G|145
8VVP|1|ZA|G|146
8VVP|1|ZA|A|147
8VVP|1|ZA|U|148
8VVP|1|ZA|A|149
8VVP|1|ZA|A|150
8VVP|1|ZA|C|151
*
8VVP|1|ZA|G|167
8VVP|1|ZA|C|168
8VVP|1|ZA|U|169
8VVP|1|ZA|A|170
8VVP|1|ZA|A|171
8VVP|1|ZA|U|172
8VVP|1|ZA|A|173
8VVP|1|ZA|C|174
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain GB
- eS6
- Chain V
- uL24
- Chain YB
- S24
Coloring options: