IL_8VVQ_036
3D structure
- PDB id
- 8VVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUGGG*CG
- Length
- 7 nucleotides
- Bulged bases
- 8VVQ|1|WA|G|730, 8VVQ|1|WA|G|731
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVQ_036 not in the Motif Atlas
- Geometric match to IL_8GLP_036
- Geometric discrepancy: 0.0748
- The information below is about IL_8GLP_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75501.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8VVQ|1|WA|C|728
8VVQ|1|WA|U|729
8VVQ|1|WA|G|730
8VVQ|1|WA|G|731
8VVQ|1|WA|G|732
*
8VVQ|1|WA|C|943
8VVQ|1|WA|G|944
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain F
- uL30
- Chain L
- eL14
- Chain R
- L18A
Coloring options: