IL_8VVQ_061
3D structure
- PDB id
- 8VVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUU*AUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVQ_061 not in the Motif Atlas
- Geometric match to IL_8CRE_037
- Geometric discrepancy: 0.0509
- The information below is about IL_8CRE_037
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
8VVQ|1|WA|U|1673
8VVQ|1|WA|U|1674
8VVQ|1|WA|U|1675
*
8VVQ|1|WA|A|1684
8VVQ|1|WA|U|1685
8VVQ|1|WA|A|1686
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain AA
- L29
- Chain K
- eL13
- Chain P
- eL18
- Chain S
- eL21
- Chain Z
- L27A
Coloring options: