IL_8VVQ_155

3D structure

PDB id

8VVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCGGAGC*GAACCUGG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVQ|1|WA|C|4740
8VVQ|1|WA|C|4741
8VVQ|1|WA|G|4742
8VVQ|1|WA|G|4745
8VVQ|1|WA|A|4746
8VVQ|1|WA|G|4747
8VVQ|1|WA|C|4748
*
8VVQ|1|WA|G|4956
8VVQ|1|WA|A|4957
8VVQ|1|WA|A|4958
8VVQ|1|WA|C|4959
8VVQ|1|WA|C|4960
8VVQ|1|WA|U|4961
8VVQ|1|WA|G|4962
8VVQ|1|WA|G|4963

Current chains

Chain WA

28S rRNA

Nearby chains

Chain EA

eL33

Chain YA

5.8S ribosomal RNA; 5.8S rRNA