IL_8VVQ_207

3D structure

PDB id

8VVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

8VVQ|1|ZA|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVQ|1|ZA|A|599
8VVQ|1|ZA|G|600
8VVQ|1|ZA|G|601
8VVQ|1|ZA|G|602
8VVQ|1|ZA|C|603
8VVQ|1|ZA|A|604
8VVQ|1|ZA|A|605
8VVQ|1|ZA|G|606
8VVQ|1|ZA|U|607
8VVQ|1|ZA|C|608
*
8VVQ|1|ZA|G|635
8VVQ|1|ZA|C|636
8VVQ|1|ZA|U|637

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain CB

S2-like

Chain DB

S3

Chain EC

S30

Chain JB

S9

Chain XB

S23