IL_8VVQ_217

3D structure

PDB id

8VVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAAAAAAUU*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVQ|1|ZA|G|807
8VVQ|1|ZA|A|808
8VVQ|1|ZA|A|809
8VVQ|1|ZA|A|810
8VVQ|1|ZA|A|811
8VVQ|1|ZA|A|812
8VVQ|1|ZA|A|813
8VVQ|1|ZA|U|814
8VVQ|1|ZA|U|815
*
8VVQ|1|ZA|A|849
8VVQ|1|ZA|C|850
8VVQ|1|ZA|C|851
8VVQ|1|ZA|G|852
8VVQ|1|ZA|C|853
8VVQ|1|ZA|A|854
8VVQ|1|ZA|G|855
8VVQ|1|ZA|C|856

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain EB

S4

Chain JB

S9

Chain LB

S11

Chain WB

S15A