IL_8VVQ_252

3D structure

PDB id

8VVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GCUCAGCGUG*CCGUUGAACCC

Length

21 nucleotides

Bulged bases

8VVQ|1|ZA|U|1585, 8VVQ|1|ZA|G|1587

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVQ|1|ZA|G|1541
8VVQ|1|ZA|C|1542
8VVQ|1|ZA|U|1543
8VVQ|1|ZA|C|1544
8VVQ|1|ZA|A|1545
8VVQ|1|ZA|G|1546
8VVQ|1|ZA|C|1547
8VVQ|1|ZA|G|1548
8VVQ|1|ZA|U|1549
8VVQ|1|ZA|G|1550
*
8VVQ|1|ZA|C|1582
8VVQ|1|ZA|C|1583
8VVQ|1|ZA|G|1584
8VVQ|1|ZA|U|1585
8VVQ|1|ZA|U|1586
8VVQ|1|ZA|G|1587
8VVQ|1|ZA|A|1588
8VVQ|1|ZA|A|1589
8VVQ|1|ZA|C|1590
8VVQ|1|ZA|C|1591
8VVQ|1|ZA|C|1592

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DB

S3

Chain DC

uS14

Chain FB

S5

Chain QB

uS9

Chain TB

S19

Chain UB

uS10

Chain ZB

eS25