IL_8VVR_087
3D structure
- PDB id
- 8VVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 8VVR|1|WA|G|2345
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVR_087 not in the Motif Atlas
- Geometric match to IL_8P9A_285
- Geometric discrepancy: 0.1121
- The information below is about IL_8P9A_285
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 23
Unit IDs
8VVR|1|WA|C|2292
8VVR|1|WA|G|2293
8VVR|1|WA|C|2294
*
8VVR|1|WA|G|2344
8VVR|1|WA|G|2345
8VVR|1|WA|U|2346
8VVR|1|WA|G|2347
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain C
- uL4
- Chain DA
- L32
- Chain PA
- L28
- Chain YA
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Z
- uL15
Coloring options: