IL_8VVS_187

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUAUGGU*AACGUC

Length

14 nucleotides

Bulged bases

8VVS|1|ZA|G|113, 8VVS|1|ZA|G|114

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|ZA|G|108
8VVS|1|ZA|U|109
8VVS|1|ZA|U|110
8VVS|1|ZA|A|111
8VVS|1|ZA|U|112
8VVS|1|ZA|G|113
8VVS|1|ZA|G|114
8VVS|1|ZA|U|115
*
8VVS|1|ZA|A|348
8VVS|1|ZA|A|349
8VVS|1|ZA|C|350
8VVS|1|ZA|G|351
8VVS|1|ZA|U|352
8VVS|1|ZA|C|353

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain EB

S4

Chain IB

S8

Chain LB

S11