IL_9AXU_040

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

AUUAGA*UAUUCU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_95349.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

3

Unit IDs

9AXU|1|2|A|1038
9AXU|1|2|U|1039
9AXU|1|2|U|1040
9AXU|1|2|A|1041
9AXU|1|2|G|1042
9AXU|1|2|A|1043
*
9AXU|1|2|U|1071
9AXU|1|2|A|1072
9AXU|1|2|U|1073
9AXU|1|2|U|1074
9AXU|1|2|C|1075
9AXU|1|2|U|1076

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain Q

Large ribosomal subunit protein uL18B

Chain V

Large ribosomal subunit protein uL16A