IL_8VVT_019

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUC*GCUAC

Length

9 nucleotides

Bulged bases

8VVT|1|WA|A|1309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|G|443
8VVT|1|WA|G|444
8VVT|1|WA|U|445
8VVT|1|WA|C|446
*
8VVT|1|WA|G|1306
8VVT|1|WA|C|1307
8VVT|1|WA|U|1308
8VVT|1|WA|A|1309
8VVT|1|WA|C|1310

Current chains

Chain WA

28S rRNA

Nearby chains

Chain DA

eL32

Chain EA

eL33

Chain YA

5.8S ribosomal RNA; 5.8S rRNA