IL_8VVT_023

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8VVT|1|WA|U|467, 8VVT|1|WA|C|686, 8VVT|1|WA|U|688

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|A|466
8VVT|1|WA|U|467
8VVT|1|WA|U|468
8VVT|1|WA|C|469
8VVT|1|WA|A|470
8VVT|1|WA|A|471
8VVT|1|WA|C|472
*
8VVT|1|WA|G|683
8VVT|1|WA|C|684
8VVT|1|WA|G|685
8VVT|1|WA|C|686
8VVT|1|WA|A|687
8VVT|1|WA|U|688
8VVT|1|WA|U|689
8VVT|1|WA|U|690

Current chains

Chain WA

28S rRNA

Nearby chains

Chain E

L6

Chain PA

eL28