IL_8VVT_042

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

8VVT|1|WA|G|1365, 8VVT|1|WA|C|1384

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|C|1363
8VVT|1|WA|G|1364
8VVT|1|WA|G|1365
8VVT|1|WA|G|1366
8VVT|1|WA|G|1367
*
8VVT|1|WA|C|1382
8VVT|1|WA|G|1383
8VVT|1|WA|C|1384
8VVT|1|WA|C|1385
8VVT|1|WA|G|1386
8VVT|1|WA|U|1387
8VVT|1|WA|G|1388

Current chains

Chain WA

28S rRNA

Nearby chains

Chain C

uL4

Chain K

eL13

Chain M

L15

Chain Z

uL15