IL_8VVT_049
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- (OMG)A(A2M)AG*CUAGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 8VVT|1|WA|A|1655, 8VVT|1|WA|G|1659
- QA status
- Modified nucleotides: OMG, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVT_049 not in the Motif Atlas
- Geometric match to IL_8P9A_256
- Geometric discrepancy: 0.0938
- The information below is about IL_8P9A_256
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
8VVT|1|WA|OMG|1527
8VVT|1|WA|A|1528
8VVT|1|WA|A2M|1529
8VVT|1|WA|A|1530
8VVT|1|WA|G|1531
*
8VVT|1|WA|C|1653
8VVT|1|WA|U|1654
8VVT|1|WA|A|1655
8VVT|1|WA|G|1656
8VVT|1|WA|U|1657
8VVT|1|WA|A|1658
8VVT|1|WA|G|1659
8VVT|1|WA|C|1660
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain C
- uL4
- Chain IA
- L37
- Chain K
- eL13
- Chain M
- L15
- Chain Z
- uL15
Coloring options: