3D structure

PDB id
8VVT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian ribosomes bound to Anisomycin in the rotated conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GGUCU*ACC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8VVT|1|WA|G|1757
8VVT|1|WA|G|1758
8VVT|1|WA|U|1759
8VVT|1|WA|C|1760
8VVT|1|WA|U|1761
*
8VVT|1|WA|A|1781
8VVT|1|WA|C|1782
8VVT|1|WA|C|1783

Current chains

Chain WA
28S rRNA

Nearby chains

Chain D
L5
Chain I
L10

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1194 s