IL_8VVT_073
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUCAUCAG*CUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 8VVT|1|WA|U|1935, 8VVT|1|WA|C|1936, 8VVT|1|WA|G|2060, 8VVT|1|WA|A|2062
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVT_073 not in the Motif Atlas
- Geometric match to IL_8CRE_054
- Geometric discrepancy: 0.1379
- The information below is about IL_8CRE_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77278.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8VVT|1|WA|C|1931
8VVT|1|WA|U|1932
8VVT|1|WA|C|1933
8VVT|1|WA|A|1934
8VVT|1|WA|U|1935
8VVT|1|WA|C|1936
8VVT|1|WA|A|1937
8VVT|1|WA|G|1938
*
8VVT|1|WA|C|2058
8VVT|1|WA|U|2059
8VVT|1|WA|G|2060
8VVT|1|WA|G|2061
8VVT|1|WA|A|2062
8VVT|1|WA|G|2063
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain H
- uL6
- Chain L
- L14
- Chain LA
- eL40
- Chain N
- uL13
- Chain R
- eL20
Coloring options: