IL_8VVT_095
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGGAAUG*CGAGAGA
- Length
- 14 nucleotides
- Bulged bases
- 8VVT|1|WA|U|2666, 8VVT|1|WA|A|2679
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVT_095 not in the Motif Atlas
- Geometric match to IL_8P9A_301
- Geometric discrepancy: 0.1533
- The information below is about IL_8P9A_301
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93476.1
- Basepair signature
- cWW-tSH-L-R-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
8VVT|1|WA|U|2661
8VVT|1|WA|G|2662
8VVT|1|WA|G|2663
8VVT|1|WA|A|2664
8VVT|1|WA|A|2665
8VVT|1|WA|U|2666
8VVT|1|WA|G|2667
*
8VVT|1|WA|C|2677
8VVT|1|WA|G|2678
8VVT|1|WA|A|2679
8VVT|1|WA|G|2680
8VVT|1|WA|A|2681
8VVT|1|WA|G|2682
8VVT|1|WA|A|2683
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain BA
- eL30
- Chain FA
- eL34
- Chain NB
- uS15
- Chain OA
- eL43
- Chain Q
- eL19
- Chain Y
- L27
Coloring options: