IL_8VVT_102
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 8VVT|1|WA|U|2885
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVT_102 not in the Motif Atlas
- Geometric match to IL_8CRE_084
- Geometric discrepancy: 0.0832
- The information below is about IL_8CRE_084
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47346.2
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
8VVT|1|WA|C|2872
8VVT|1|WA|G|2873
8VVT|1|WA|U|2874
8VVT|1|WA|A|2875
8VVT|1|WA|A|2876
8VVT|1|WA|C|2877
*
8VVT|1|WA|G|2882
8VVT|1|WA|G|2883
8VVT|1|WA|A|2884
8VVT|1|WA|U|2885
8VVT|1|WA|A|2886
8VVT|1|WA|A|2887
8VVT|1|WA|G|2888
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain MA
- eL41
- Chain OA
- eL43
- Chain ZA
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: