IL_8VVT_109

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

8VVT|1|WA|A|3716

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|C|3713
8VVT|1|WA|U|3714
8VVT|1|WA|G|3715
8VVT|1|WA|A|3716
8VVT|1|WA|A|3717
8VVT|1|WA|U|3718
8VVT|1|WA|G|3719
*
8VVT|1|WA|C|3744
8VVT|1|WA|G|3745
8VVT|1|WA|C|3746
8VVT|1|WA|G|3747

Current chains

Chain WA

28S rRNA

Nearby chains

Chain A

L8

Chain ZA

Small subunit ribosomal RNA; SSU rRNA