IL_8VVT_149

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAACG*CUCGC

Length

11 nucleotides

Bulged bases

8VVT|1|WA|C|4900

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|G|4896
8VVT|1|WA|A|4897
8VVT|1|WA|A|4898
8VVT|1|WA|A|4899
8VVT|1|WA|C|4900
8VVT|1|WA|G|4901
*
8VVT|1|WA|C|4929
8VVT|1|WA|U|4930
8VVT|1|WA|C|4931
8VVT|1|WA|G|4932
8VVT|1|WA|C|4933

Current chains

Chain WA

28S rRNA

Nearby chains

Chain L

L14

Chain N

uL13