IL_8VVT_178

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCGCUGAC*GGAUGCGU

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|ZA|G|185
8VVT|1|ZA|C|186
8VVT|1|ZA|G|187
8VVT|1|ZA|C|188
8VVT|1|ZA|U|189
8VVT|1|ZA|G|190
8VVT|1|ZA|A|191
8VVT|1|ZA|C|192
*
8VVT|1|ZA|G|207
8VVT|1|ZA|G|208
8VVT|1|ZA|A|209
8VVT|1|ZA|U|210
8VVT|1|ZA|G|211
8VVT|1|ZA|C|212
8VVT|1|ZA|G|213
8VVT|1|ZA|U|214

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain EB

eS4

Chain IB

eS8