IL_8VVT_184

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUUCGA*UGG

Length

10 nucleotides

Bulged bases

8VVT|1|ZA|U|368, 8VVT|1|ZA|C|369

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|ZA|C|365
8VVT|1|ZA|U|366
8VVT|1|ZA|U|367
8VVT|1|ZA|U|368
8VVT|1|ZA|C|369
8VVT|1|ZA|G|370
8VVT|1|ZA|A|371
*
8VVT|1|ZA|U|393
8VVT|1|ZA|G|394
8VVT|1|ZA|G|395

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain IB

eS8

Chain LB

S11

Chain WA

Large subunit ribosomal RNA; LSU rRNA