IL_8VVT_185
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 8VVT|1|ZA|A|426, 8VVT|1|ZA|U|427, 8VVT|1|ZA|U|428
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVT_185 not in the Motif Atlas
- Homologous match to IL_9H3G_175
- Geometric discrepancy: 0.4926
- The information below is about IL_9H3G_175
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93336.4
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
8VVT|1|ZA|G|411
8VVT|1|ZA|G|412
8VVT|1|ZA|G|413
*
8VVT|1|ZA|C|424
8VVT|1|ZA|G|425
8VVT|1|ZA|A|426
8VVT|1|ZA|U|427
8VVT|1|ZA|U|428
8VVT|1|ZA|C|429
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain EB
- eS4
- Chain JB
- S9
- Chain XB
- uS12
Coloring options: