IL_8VVT_188
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUA*UA
- Length
- 5 nucleotides
- Bulged bases
- 8VVT|1|ZA|U|488
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVT_188 not in the Motif Atlas
- Geometric match to IL_5J7L_017
- Geometric discrepancy: 0.1853
- The information below is about IL_5J7L_017
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
8VVT|1|ZA|U|487
8VVT|1|ZA|U|488
8VVT|1|ZA|A|489
*
8VVT|1|ZA|U|511
8VVT|1|ZA|A|512
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain EB
- eS4
- Chain JB
- S9
- Chain YB
- eS24
- Chain v
- eukaryotic elongation factor 2
Coloring options: