IL_8VVT_205
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAAAAAUU*ACCGCAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVT_205 not in the Motif Atlas
- Homologous match to IL_9H3G_194
- Geometric discrepancy: 0.2909
- The information below is about IL_9H3G_194
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_59049.5
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
8VVT|1|ZA|G|807
8VVT|1|ZA|A|808
8VVT|1|ZA|A|809
8VVT|1|ZA|A|810
8VVT|1|ZA|A|811
8VVT|1|ZA|A|812
8VVT|1|ZA|A|813
8VVT|1|ZA|U|814
8VVT|1|ZA|U|815
*
8VVT|1|ZA|A|849
8VVT|1|ZA|C|850
8VVT|1|ZA|C|851
8VVT|1|ZA|G|852
8VVT|1|ZA|C|853
8VVT|1|ZA|A|854
8VVT|1|ZA|G|855
8VVT|1|ZA|C|856
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain EB
- eS4
- Chain JB
- S9
- Chain LB
- S11
- Chain WB
- S15A
Coloring options: