IL_8VVT_217

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAUGCG*CGGGCAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|ZA|C|1098
8VVT|1|ZA|G|1099
8VVT|1|ZA|A|1100
8VVT|1|ZA|U|1101
8VVT|1|ZA|G|1102
8VVT|1|ZA|C|1103
8VVT|1|ZA|G|1104
*
8VVT|1|ZA|C|1128
8VVT|1|ZA|G|1129
8VVT|1|ZA|G|1130
8VVT|1|ZA|G|1131
8VVT|1|ZA|C|1132
8VVT|1|ZA|A|1133
8VVT|1|ZA|G|1134

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain AB

uS2

Chain AC

eS26

Chain BB

S3A

Chain BC

S27

Chain NB

uS15

Chain RB

eS17