IL_8VVT_226

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GACAGGA*UUC

Length

10 nucleotides

Bulged bases

8VVT|1|ZA|A|1284, 8VVT|1|ZA|G|1285, 8VVT|1|ZA|G|1286, 8VVT|1|ZA|U|1315

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|ZA|G|1281
8VVT|1|ZA|A|1282
8VVT|1|ZA|C|1283
8VVT|1|ZA|A|1284
8VVT|1|ZA|G|1285
8VVT|1|ZA|G|1286
8VVT|1|ZA|A|1287
*
8VVT|1|ZA|U|1314
8VVT|1|ZA|U|1315
8VVT|1|ZA|C|1316

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain FC

S27A

Chain KB

eS10

Chain MB

S12