IL_8VVT_228

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUGACAG*CUUUCUCGAU

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|ZA|A|1287
8VVT|1|ZA|U|1288
8VVT|1|ZA|U|1289
8VVT|1|ZA|G|1290
8VVT|1|ZA|A|1291
8VVT|1|ZA|C|1292
8VVT|1|ZA|A|1293
8VVT|1|ZA|G|1294
*
8VVT|1|ZA|C|1305
8VVT|1|ZA|U|1306
8VVT|1|ZA|U|1307
8VVT|1|ZA|U|1308
8VVT|1|ZA|C|1309
8VVT|1|ZA|U|1310
8VVT|1|ZA|C|1311
8VVT|1|ZA|G|1312
8VVT|1|ZA|A|1313
8VVT|1|ZA|U|1314

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DC

uS14

Chain FC

S27A

Chain KB

eS10

Chain MB

S12

Chain PB

uS19