IL_8VVU_041

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAAGGUGGC*GUGUUACAGC

Length

19 nucleotides

Bulged bases

8VVU|1|WA|G|750, 8VVU|1|WA|C|918

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|WA|G|747
8VVU|1|WA|A|748
8VVU|1|WA|A|749
8VVU|1|WA|G|750
8VVU|1|WA|G|751
8VVU|1|WA|U|752
8VVU|1|WA|G|753
8VVU|1|WA|G|754
8VVU|1|WA|C|755
*
8VVU|1|WA|G|912
8VVU|1|WA|U|913
8VVU|1|WA|G|914
8VVU|1|WA|U|915
8VVU|1|WA|U|916
8VVU|1|WA|A|917
8VVU|1|WA|C|918
8VVU|1|WA|A|919
8VVU|1|WA|G|920
8VVU|1|WA|C|921

Current chains

Chain WA

28S rRNA

Nearby chains

Chain L

eL14

Chain R

L18A