IL_8VVU_186
3D structure
- PDB id
- 8VVU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 8VVU|1|ZA|C|65, 8VVU|1|ZA|C|67
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVU_186 not in the Motif Atlas
- Geometric match to IL_8P9A_379
- Geometric discrepancy: 0.2908
- The information below is about IL_8P9A_379
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.2
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8VVU|1|ZA|U|63
8VVU|1|ZA|A|64
8VVU|1|ZA|C|65
8VVU|1|ZA|G|66
8VVU|1|ZA|C|67
8VVU|1|ZA|A|68
*
8VVU|1|ZA|U|81
8VVU|1|ZA|G|82
8VVU|1|ZA|A|83
8VVU|1|ZA|A|84
8VVU|1|ZA|A|85
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain GB
- eS6
- Chain V
- uL24
- Chain YB
- S24
Coloring options: