IL_8VVU_187

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUUAUGGU*AACGUC

Length

14 nucleotides

Bulged bases

8VVU|1|ZA|G|113

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|ZA|G|108
8VVU|1|ZA|U|109
8VVU|1|ZA|U|110
8VVU|1|ZA|A|111
8VVU|1|ZA|U|112
8VVU|1|ZA|G|113
8VVU|1|ZA|G|114
8VVU|1|ZA|U|115
*
8VVU|1|ZA|A|348
8VVU|1|ZA|A|349
8VVU|1|ZA|C|350
8VVU|1|ZA|G|351
8VVU|1|ZA|U|352
8VVU|1|ZA|C|353

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain EB

S4

Chain IB

S8

Chain LB

S11