IL_8VVU_206

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

8VVU|1|ZA|U|607

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|ZA|A|599
8VVU|1|ZA|G|600
8VVU|1|ZA|G|601
8VVU|1|ZA|G|602
8VVU|1|ZA|C|603
8VVU|1|ZA|A|604
8VVU|1|ZA|A|605
8VVU|1|ZA|G|606
8VVU|1|ZA|U|607
8VVU|1|ZA|C|608
*
8VVU|1|ZA|G|635
8VVU|1|ZA|C|636
8VVU|1|ZA|U|637

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain CB

S2-like

Chain DB

S3

Chain EC

S30

Chain JB

S9

Chain XB

S23