IL_8VVU_216

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAAAAAAUU*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|ZA|G|807
8VVU|1|ZA|A|808
8VVU|1|ZA|A|809
8VVU|1|ZA|A|810
8VVU|1|ZA|A|811
8VVU|1|ZA|A|812
8VVU|1|ZA|A|813
8VVU|1|ZA|U|814
8VVU|1|ZA|U|815
*
8VVU|1|ZA|A|849
8VVU|1|ZA|C|850
8VVU|1|ZA|C|851
8VVU|1|ZA|G|852
8VVU|1|ZA|C|853
8VVU|1|ZA|A|854
8VVU|1|ZA|G|855
8VVU|1|ZA|C|856

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain EB

S4

Chain JB

S9

Chain LB

S11

Chain WB

S15A