IL_8VVU_233

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

ACCAC*GUCCCU

Length

11 nucleotides

Bulged bases

8VVU|1|ZA|C|1215, 8VVU|1|ZA|C|1216

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|ZA|A|1214
8VVU|1|ZA|C|1215
8VVU|1|ZA|C|1216
8VVU|1|ZA|A|1217
8VVU|1|ZA|C|1218
*
8VVU|1|ZA|G|1680
8VVU|1|ZA|U|1681
8VVU|1|ZA|C|1682
8VVU|1|ZA|C|1683
8VVU|1|ZA|C|1684
8VVU|1|ZA|U|1685

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain CC

S28

Chain FB

S5

Chain QB

uS9

Chain SA

Transfer RNA; tRNA

Chain TA

Transfer RNA; tRNA

Chain VA

mRNA