IL_8VVU_237

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GACAGGAUUGACA*UUUCUCGAUUC

Length

24 nucleotides

Bulged bases

8VVU|1|ZA|G|1285

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|ZA|G|1281
8VVU|1|ZA|A|1282
8VVU|1|ZA|C|1283
8VVU|1|ZA|A|1284
8VVU|1|ZA|G|1285
8VVU|1|ZA|G|1286
8VVU|1|ZA|A|1287
8VVU|1|ZA|U|1288
8VVU|1|ZA|U|1289
8VVU|1|ZA|G|1290
8VVU|1|ZA|A|1291
8VVU|1|ZA|C|1292
8VVU|1|ZA|A|1293
*
8VVU|1|ZA|U|1306
8VVU|1|ZA|U|1307
8VVU|1|ZA|U|1308
8VVU|1|ZA|C|1309
8VVU|1|ZA|U|1310
8VVU|1|ZA|C|1311
8VVU|1|ZA|G|1312
8VVU|1|ZA|A|1313
8VVU|1|ZA|U|1314
8VVU|1|ZA|U|1315
8VVU|1|ZA|C|1316

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DC

uS14

Chain FC

S27A

Chain KB

S10

Chain MB

S12