IL_8VVU_249

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCUCAGCGUG*CCGUUGAACCC

Length

21 nucleotides

Bulged bases

8VVU|1|ZA|U|1585, 8VVU|1|ZA|G|1587

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|ZA|G|1541
8VVU|1|ZA|C|1542
8VVU|1|ZA|U|1543
8VVU|1|ZA|C|1544
8VVU|1|ZA|A|1545
8VVU|1|ZA|G|1546
8VVU|1|ZA|C|1547
8VVU|1|ZA|G|1548
8VVU|1|ZA|U|1549
8VVU|1|ZA|G|1550
*
8VVU|1|ZA|C|1582
8VVU|1|ZA|C|1583
8VVU|1|ZA|G|1584
8VVU|1|ZA|U|1585
8VVU|1|ZA|U|1586
8VVU|1|ZA|G|1587
8VVU|1|ZA|A|1588
8VVU|1|ZA|A|1589
8VVU|1|ZA|C|1590
8VVU|1|ZA|C|1591
8VVU|1|ZA|C|1592

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DB

S3

Chain DC

uS14

Chain FB

S5

Chain QB

uS9

Chain TB

S19

Chain UB

uS10

Chain ZB

eS25