IL_8VVU_250

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

8VVU|1|ZA|A|1580, 8VVU|1|ZA|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|ZA|G|1550
8VVU|1|ZA|U|1551
8VVU|1|ZA|G|1552
8VVU|1|ZA|C|1553
8VVU|1|ZA|C|1554
8VVU|1|ZA|U|1555
8VVU|1|ZA|A|1556
8VVU|1|ZA|C|1557
8VVU|1|ZA|C|1558
*
8VVU|1|ZA|G|1577
8VVU|1|ZA|U|1578
8VVU|1|ZA|A|1579
8VVU|1|ZA|A|1580
8VVU|1|ZA|C|1581
8VVU|1|ZA|C|1582

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DB

S3

Chain DC

uS14

Chain KB

S10

Chain UB

uS10