IL_8VVV_011

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CACUCC*GCCCG

Length

11 nucleotides

Bulged bases

8VVV|1|5|C|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVV|1|5|C|168
8VVV|1|5|A|169
8VVV|1|5|C|170
8VVV|1|5|U|171
8VVV|1|5|C|172
8VVV|1|5|C|173
*
8VVV|1|5|G|263
8VVV|1|5|C|264
8VVV|1|5|C|265
8VVV|1|5|C|266
8VVV|1|5|G|267

Current chains

Chain 5

28S rRNA

Nearby chains

Chain L

eL13

Chain h

uL29