IL_8VVV_023

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8VVV|1|5|U|688

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVV|1|5|A|466
8VVV|1|5|U|467
8VVV|1|5|U|468
8VVV|1|5|C|469
8VVV|1|5|A|470
8VVV|1|5|A|471
8VVV|1|5|C|472
*
8VVV|1|5|G|683
8VVV|1|5|C|684
8VVV|1|5|G|685
8VVV|1|5|C|686
8VVV|1|5|A|687
8VVV|1|5|U|688
8VVV|1|5|U|689
8VVV|1|5|U|690

Current chains

Chain 5

28S rRNA

Nearby chains

Chain E

L6

Chain r

eL28