IL_8VVV_071
3D structure
- PDB id
- 8VVV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the nonrotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAA(P7G)*CCAUA
- Length
- 10 nucleotides
- Bulged bases
- 8VVV|1|5|U|2076
- QA status
- Modified nucleotides: P7G
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVV_071 not in the Motif Atlas
- Geometric match to IL_8CRE_051
- Geometric discrepancy: 0.1639
- The information below is about IL_8CRE_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
8VVV|1|5|U|1911
8VVV|1|5|U|1912
8VVV|1|5|A|1913
8VVV|1|5|A|1914
8VVV|1|5|P7G|1915
*
8VVV|1|5|C|2073
8VVV|1|5|C|2074
8VVV|1|5|A|2075
8VVV|1|5|U|2076
8VVV|1|5|A|2077
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain F
- uL30
- Chain Q
- eL18
- Chain e
- eL32
- Chain f
- eL33
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